The most divisive issue that arose was whether Francis would loosen the Vatican's strict position on whether Catholics who divorce and remarry can receive Communion.
Church teaching holds that unless these Catholics receive an annulment, or a church decree that their first marriage was invalid, they are committing adultery and cannot receive Communion.
Conservatives had insisted that the rules were fixed and that there was no way around Christ's teaching on the indissolubility of marriage.
Progressives had sought wiggle room to balance doctrine with mercy and look at each couple on a case-by-case basis, accompanying them on a path of reconciliation that could lead to them eventually receiving the sacraments.
Francis took a unilateral step last year in changing church law to make it easier to get an annulment. Today, he said the rigorous response proposed by the conservatives was inconsistent with Jesus' message of mercy.
"By thinking that everything is black and white, we sometimes close off the way of grace and of growth and discourage paths of sanctification which give glory to God," he said.
"Let us remember that a small step in the midst of great human limitations can be more pleasing to God than a life which appears outwardly in order but moves through the day without confronting great difficulties."
Francis didn't endorse the "penitential path" of bringing such civilly remarried Catholics to Communion that was advocated by leading progressives such as Cardinal Walter Kasper. But he repeated what the synod had endorsed of the need for pastors to help individual Catholics over the course of spiritual direction to ascertain what God is asking of them.
And he went further by explicitly linking such discussions of conscience with having access to the sacraments.
In footnotes, Francis cited his previous document "The Joy of the Gospel" in saying that the Eucharist "is not a prize for the perfect but a powerful medicine and nourishment for the weak."
In many ways the document is significant for what it doesn't say. While Francis frequently cited John Paul, whose papacy was characterised by a hardline insistence on doctrine and sexual morals, he did so selectively.
Francis referenced certain parts of John Paul's 1981 "Familius Consortio," the guiding Vatican document on family life until Friday, but he omitted any reference to its most divisive paragraph 83, which explicitly forbids the sacraments for the divorced and civilly remarried.
In fact, Francis went further than mere omission and squarely rejected John Paul's call in that document for people in civil second marriages to live as brother and sister, abstaining from sex so they can still receive the sacraments.
In a footnote, Francis said that many people offered such a solution by the church "point out that if certain expressions of intimacy are lacking it often happens that faithfulness is endangered and the good of children suffer."