The fishermen crossed over to India this evening on the basis of 'emergency travel certificates' issued by the Indian High Commission in Islamabad, officials said.
Immediately after the repatriation, a medical examination of all the fishermen was conducted, they said.
The neighbouring country had released the first batch of 100 Indian fishermen on April 7.
The fishermen were arrested for fishing illegally in Pakistani waters during various operations.
Both the countries frequently arrest fishermen as there is no clear demarcation of the maritime border in the Arabian Sea and these fishermen do not have boats equipped with the technology to know their precise location.
Owing to the lengthy and slow bureaucratic and legal procedures, the fishermen usually remain in jail for several months and sometimes years.